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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939995.1_cds_XP_016484377.1_75395
CDS Infomation

[gene=LOC107804934] [db_xref=GeneID:107804934] [protein=polycomb group protein EMBRYONIC FLOWER 2-like isoform X3] [protein_id=XP_016484377.1] [location=complement(join(5522..5645,6142..6231,7335..7414,9003..9086,11833..11881,17959..18005,18436..18495,18581..18634,18780..18832,19602..19666,20451..20572,20682..20744,23218..23357,24422..24463,24539..24698,24783..24900,26029..26084,26543..26711,26840..26874))] [gbkey=CDS]
Sequence

ATGCCAGGCATACCTTTAGTGGCTCGTGAAACCACGCATTACACTTGCTACTGCAGTTAC
TCTACAGTTACCGACTCAATGTGCAGGCAAGATTCTGCTACACATTTGTCTGCAGAGGAG
AAGATTGATGCTGAAGAAAGCCTTTCAACTTATTGCAAACCTGTTGAACTCTACAACATT
CTCCAACGCCGTGCCGTTAGAAATCCTTCCTTCCTTCAAAGATGTTTACAATACAAAATT
CAAGCAAAGCACAAAAGGAGGATTGAAATGGCAATATCTGTACCAGCAACTGTGAACGAT
GAATCACAGATTCAAAATGTTTTTCCTCTGTGTGTAATTTTGGCAAGGCCATTATCAAAT
GCTGCGGGTGCTGAGGCACATTTTGCTGTCTTTCAATTTAGGCGGGCATGCATATCAACT
TCTTTCACTGGAGTTGATGGAATAAATCGAGCTCAAGCAAAATTCTTTCTTCCTGAAATG
GATAAACTTTCAGCTGAAGTAAGGGCTGGCTCTCTTGCCATCCTGTTTGTCAGCTTTGCT
AAACTTGCTAGAGATCTTTTGGATACATCTTCATTTCCATTGAATCTTGAAGGGAACTGC
TTGTTGGGAAGAATGCCGATGGAATTACTTCATCTATTGTGGGAAAAGTCTCCCAATTTG
AGTTTAGGGGAGAGAGCTGAGATGTTGTCAACTGTTGACTTGAGCCCTTGTTTTATGAAG
ACAAGCTGTTTGGACAAAGACAGACATATTTCCTTGCAGTATCCCCGTAGTTCTGTACCT
CTGGCAACAATACATCAGCTGCAAGTCAAAATTTCTGCAGAAGAAGCTGGTGCTGGAGAA
AGATCAGCTTATGATTCATTCTCCTATGATGACATTCCTACGACTTCATTGCCTCGAATA
ATACGGTTGAGGACAGGAAATGTTGTCTTCAACTATAGGTACTATAACAACAAGTTGCAG
AGAACAGAAGTGACTGAGGACTTCACATGTCCTCTTTGCTTGGTAAAATGTGCCAGCTTT
AAGGGTTTGAGATATCACTTATGCTCATCTCACGATTTGTTCAACTTTGAATTTTGGGTA
AATGAAGAATATCAAGCTGTAAATGTATCTGTGAGAAGTGACATGTGGAGATCTGAGGTT
GTTGTTAATGGCGTTGATCCTAAGCAACAAACATTCTTCTTTTGTCGTGCACTCCTGCAA
AAAAGGCAATTCTTTCATTCTCATAGAGCCCAGCCCATGGCACTGGAGCAAGTTTTATCG
GATCGAGACAGCGAGGATGAAGTTGATGATGATGTTGCAGATCTTGAAGATCGAAGGATG
CTTGATGATTTCGTGGATGTTACCAAAGATGAGAAGCAAATGATGCATCTGTGGAACTCA
TTTGTTAGAAAGCAAAGGGTGTTGGCAGATGGTCACATTCCTTGGGCATGTGAGGCTTTT
TCAAAGCTGCATGGTGAGGAGTTCGCCCGGGCACCGGCCTTCTTGTGGTGCTGGAGATTA
TTCATGATCAAACTGTGGAACCATGGCCTTATTGATGCGCGTGGAATCAACAATTGTAAC
TTAATCCTAGAGCAATTCCAAAGCCAAGACAATGATTCTACTAGAAGCTGA

Peptide Sequence

PEP ID

XP_016484377.1
PEP Infomation

PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like isoform X3 [Nicotiana tabacum]
Sequence

MPGIPLVARETTHYTCYCSYSTVTDSMCRQDSATHLSAEEKIDAEESLSTYCKPVELYNI
LQRRAVRNPSFLQRCLQYKIQAKHKRRIEMAISVPATVNDESQIQNVFPLCVILARPLSN
AAGAEAHFAVFQFRRACISTSFTGVDGINRAQAKFFLPEMDKLSAEVRAGSLAILFVSFA
KLARDLLDTSSFPLNLEGNCLLGRMPMELLHLLWEKSPNLSLGERAEMLSTVDLSPCFMK
TSCLDKDRHISLQYPRSSVPLATIHQLQVKISAEEAGAGERSAYDSFSYDDIPTTSLPRI
IRLRTGNVVFNYRYYNNKLQRTEVTEDFTCPLCLVKCASFKGLRYHLCSSHDLFNFEFWV
NEEYQAVNVSVRSDMWRSEVVVNGVDPKQQTFFFCRALLQKRQFFHSHRAQPMALEQVLS
DRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHLWNSFVRKQRVLADGHIPWACEAF
SKLHGEEFARAPAFLWCWRLFMIKLWNHGLIDARGINNCNLILEQFQSQDNDSTRS

Transcript Sequence

Gene sequence data has not been registered.